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The Catalyst: The Swain Library Newsletter

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Latest Issue: Winter 2006

Contact Grace Baysinger, graceb@stanford.edu, to receive The Catalyst by e-mail.

Contents

  1. ChemDraw Standard Site License for Stanford
  2. Chemistry Database Workshops Being Held at Lane
  3. NYAS’ Science Alliance — Free Membership for Grads & Postdocs
  4. 3D Structure Viewing in SciFinder Scholar

ChemDraw Standard Site License for Stanford

2006 Jan. 5

I am pleased to announce that the Stanford University Libraries and Academic Information Resources (SU*LAIR) / Academic Computing has paid for a campus-wide site license to ChemDraw Standard, a version of the popular chemical drawing program by CambridgeSoft. The URL to download it is at:

http://scistore.cambridgesoft.com/sitelicense.cfm?sid=188

This site license allows all current Stanford students, faculty, and staff to download the program FOR FREE to their home, office, or personal computer. Users must have an email address that ends with:

  • @stanford.edu
  • @slac.stanford.edu
  • @globalecology.stanford.edu

Note that after downloading, no Internet connection is required for use. The license key you will receive as part of the registration process does include a timer that corresponds to the time frame of the annual site license agreement.

Chemistry Database Workshops Being Held at Lane

2006 Jan. 13

I just wanted to let you know that I’m doing some workshops on chemistry databases at Lane. All sessions will be held in their Computer Lab — Room M202. You are most welcome to attend. Note that registration is required. They include:

Overview of Chemistry Tools and Databases for Life Scientists
Wed, Jan 18, 5:00 – 6:30 pm
Easy-to-Use Tool for Chemical Literature and Structure Searching: SciFinder Scholar
Wed, Jan 25, 5:00 – 6:30 pm
Locating Properties, Reactions, and Chemical Structures with Beilstein and Gmelin Crossfire
Wed, Feb 8, 5:00 – 6:30 pm
Locating Bioactivity, Metabolism and Synthesis Information With MDL Academic Package
Wed, Feb 15, 5:00 – 6:30 pm

For more information as well as a list of all their Winter Workshops and Tours, please see:

http://lane.stanford.edu/classes/index.html

NYAS’ Science Alliance — Free Membership for Grads & Postdocs

2006 Jan. 13

Falconer and Swain Libraries are supporting graduate students and postdocs in the Departments of Biological Sciences, Chemistry, and Chemical Engineering for membership in the New York Academy of Sciences on a trial basis through May 31, 2006. At that time we will evaluate the success of the program.

The FREE membership sign-up process is simple. Go to

http://www.nyas.org/stanford

and complete the online registration form. Your NYAS membership certificate and ID card will be sent to you by post along with related Academy materials. Once your membership is processed, an email from the Academy will be sent with your username and temporary password for online access.

Your membership benefits include:

  • Exclusive access to all of the 200+Academy eBriefings described below;
  • Free access to Academy meetings and discounts on Academy conferences; and
  • Unrestricted access to Annals Online, the Academy's searchable database of downloadable scientific articles.

For close to 200 years the Academy has been convening groups of scientists from around the world to communicate about critical issues. Its members have included Darwin, Einstein, Pasteur, Edison, Bell, Huxley, Pauling, and other leaders in science. Today, 16 Nobel Laureates are members of the NYAS President's Council. You can peruse the full list of Nobel laureates and other leaders at this URL:
http://www.nyas.org/about/ceoCouncil.asp.

The Academy recently initiated two new programs: “Frontiers of Science” and “Science Without Borders.” Through the Frontiers initiative, the New York Academy of Sciences hosts more than 140 meetings and conferences of scientists throughout the United States in areas where today’s most exciting research is being done: chemical biology, emerging infectious diseases, systems biology, genomic medicine, nanobiotechnology, neurodegenerative diseases, and RNAi. Coming soon will be events in cancer and signaling and diabetes and obesity. You can read more about what the Academy is doing in these areas, and others, at:
http://www.nyas.org/programs/channels.asp.

A special advantage of Academy membership is that those who cannot personally attend its meetings can read free reports of these events within six weeks of the meeting. The Academy calls these reports “eBriefings” because they provide scientists who are normally too busy to visit webcasts with the most important highlights of each speaker’s talk. For those wishing to dig more deeply, there are PowerPoint presentations and entire transcripts as well as additional links to other resources, all posted online.

The Academy now has more than 200 eBriefings online. The searchable audio and slides provide almost as rich an experience as actually being present — and these are exclusively available to members. You can sample a selection of the best eBriefings at
http://www.nyas.org/prespick.

With Academy membership you will also be joining thousands of graduate students and postdocs around the world who are part of the Science Alliance of Graduate Students and Postdocs. The Science Alliance provides mentoring, networking, and career development for young investigators through local events, eBriefings, and a resource-filled web portal. Visit
http://www.nyas.org/sa
for more details.

The Falconer and Swain Libraries are supporting your membership this year on a trial basis. We hope you will take advantage of this new source of science research, much of it from leading scientists reporting on their work prior to publication. Later, we hope you will let us know about its value.

3D Structure Viewing in SciFinder Scholar

2006 Jan. 13

It is possible to view most of the chemical substances in SciFinder Scholar in 3D and saved as .mol files for personal use. Accelrys’ software program ViewerLite is the 3D viewer. Please note that the viewer is only available for PCs, not Macs. See instructions below:

Downloading the Program
Installing the Program
  • Open ViewerLite folder with SciFinder Scholar bundle of software and install the software in the Program Files.
  • Unzip and place the patch files in the folder created for ViewerLite in the Program Files.

    Note that there are two ViewerLite folders on your computer: one within SFS and one in the Program Files. Be sure to put patch files within Program Files folder for ViewerLite.

Initializing ViewerLite with Windows Operating System
  • After installing ViewerLite, launch it and open one of the .mol files stored in the program. Viewing one of the structures within ViewerLite completes the registration process with the Windows Operating System. This step must be done in order for ViewerLite to work within SFS.
Viewing 3D Structures in SFS
  • Do test search in SFS (e.g. Locate by Substance Identifier using CAS Registry Number 58-22-0).
  • Look for upside down “Mickey Mouse” shaped icon in brief structure display, click on it to view structure in 3D. Use View menu bar to change the display style (e.g. ball and stick). Structure can be saved as .mol file for viewing outside SFS.

Please contact me if you need further assistance.

Grace Baysinger
Head Librarian & Bibliographer, Swain Library of Chemistry & Chemical Engineering
URL: http://library.stanford.edu/depts/swain/index.html
Head, Science and Engineering Libraries Resource Group



Last modified: May 10, 2006

   
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